PDBsum entry 3ukf Go to PDB code:  Pore analysis for: 3ukf calculated with MOLE 2.0 PDB id 3ukf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 4.15 4.21 45.2 -2.58 -0.60 34.0 85 7 5 2 5 0 1 0   2 1.42 1.57 58.7 -0.82 -0.29 14.6 86 3 2 1 2 1 1 0   3 1.42 1.57 95.3 -1.82 -0.51 26.8 87 10 8 5 5 1 0 0   4 2.14 3.40 127.2 -1.29 -0.19 17.1 84 10 6 12 9 6 3 0  MSE 149 C MSE 150 C MSE 159 C FDA 600 C GDU 802 C 5 1.31 1.49 174.0 -0.90 -0.09 15.6 85 14 4 12 10 7 3 0  MSE 149 C MSE 150 C MSE 159 C FDA 600 C GDU 802 C 6 1.24 1.24 178.9 -0.88 -0.01 13.6 78 9 5 9 7 12 4 0  MSE 149 C MSE 150 C MSE 159 C MSE 174 C FDA 600 C GDU 802 C 7 1.24 1.24 194.9 -1.30 -0.34 19.5 82 12 11 9 5 7 3 0  MSE 174 C FDA 600 C 8 1.21 1.22 215.9 -0.88 -0.22 17.3 84 15 7 10 7 8 1 0  MSE 174 C FDA 600 C 9 1.28 2.43 34.2 0.18 -0.06 8.2 78 2 0 2 9 1 0 0  MSE 149 G 10 1.23 2.30 115.0 -0.45 0.01 9.3 78 6 3 9 15 8 4 0  MSE 149 G MSE 150 G MSE 159 G FDA 600 G GDU 802 G 11 1.29 1.29 124.4 -1.12 -0.13 12.8 79 8 5 6 8 7 4 0  MSE 149 E MSE 150 E MSE 159 E FDA 600 E GDU 802 E 12 2.02 3.92 145.9 -1.18 -0.16 14.7 81 8 5 12 10 8 5 0  MSE 349 A MSE 149 D MSE 150 D MSE 159 D FDA 600 D GDU 802 D 13 1.23 1.23 149.8 -0.76 0.00 12.2 78 8 3 9 8 14 2 0  MSE 149 E MSE 150 E MSE 159 E MSE 174 E FDA 600 E GDU 802 E 14 2.04 2.80 208.7 -1.23 -0.16 17.1 82 13 4 11 10 8 3 0  MSE 149 B MSE 150 B MSE 159 B FDA 600 B GDU 802 B 15 1.26 1.28 237.5 -1.03 -0.14 14.3 77 12 7 11 9 14 4 0  MSE 149 B MSE 150 B MSE 159 B MSE 174 B FDA 600 B GDU 802 B 16 1.23 1.28 298.4 -1.41 -0.36 20.0 82 14 11 10 7 7 3 0  MSE 174 B FDA 600 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.