PDBsum entry 3u3d Go to PDB code:  Pore analysis for: 3u3d calculated with MOLE 2.0 PDB id 3u3d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.22 36.8 -0.05 -0.13 10.1 95 2 0 6 6 2 0 0  GOL 274 A MYK 9 B 2 1.93 2.17 42.8 0.87 0.40 9.9 88 3 1 5 12 5 0 0  GOL 274 A MYK 9 B 3 1.22 1.22 48.3 1.09 0.36 7.8 87 2 2 3 14 4 0 0  GOL 274 A MYK 9 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.