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PDBsum entry 3ty5

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3ty5 calculated with MOLE 2.0 PDB id
3ty5
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.82 2.82 27.7 -2.29 -0.64 30.3 85 5 4 1 2 0 1 0  ADP 1001 B
2 2.08 2.30 29.2 -1.83 -0.13 22.1 78 4 3 2 3 2 1 0  ADP 1001 B
3 1.47 1.47 55.5 -1.67 -0.53 19.9 86 5 4 4 2 2 0 1  ATP 1001 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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