PDBsum entry 3ty5 Go to PDB code:  Tunnel analysis for: 3ty5 calculated with MOLE 2.0 PDB id 3ty5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.35 45.4 0.01 0.10 13.4 79 5 0 0 10 2 2 0  ATP 1001 A 2 1.16 1.38 56.9 -1.33 -0.29 21.2 81 9 3 3 6 2 2 0  ATP 1001 A 3 1.14 1.37 65.5 -1.01 -0.23 16.7 75 7 4 3 7 5 2 1  ATP 1001 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.