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PDBsum entry 3twb

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3twb calculated with MOLE 2.0 PDB id
3twb
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.89 1.89 27.8 -1.32 -0.39 15.9 85 4 2 2 3 0 2 0  
2 3.17 3.28 33.5 -2.57 -0.48 26.9 77 3 3 1 1 1 1 0  
3 1.95 1.96 34.4 -1.71 -0.73 11.2 88 3 3 4 0 0 2 0  
4 1.39 1.39 36.6 -0.94 -0.34 20.1 82 4 3 1 3 0 2 0  
5 1.23 1.44 39.1 -0.14 -0.19 9.9 90 4 1 3 4 1 1 0  
6 1.37 2.41 55.2 -1.88 -0.46 21.4 84 5 5 4 2 0 3 0  
7 1.23 1.42 60.8 -0.45 -0.25 11.3 87 4 3 6 5 1 2 0  
8 1.59 2.57 60.7 -1.45 -0.49 13.6 87 7 4 6 3 0 3 0  
9 1.22 1.43 63.1 -0.78 -0.43 13.9 85 5 4 5 6 2 2 0  
10 1.22 1.48 77.9 -1.49 -0.31 15.3 84 6 2 6 7 4 2 0  
11 1.17 1.41 82.0 -1.10 -0.25 13.6 85 6 2 5 8 3 2 0  
12 1.22 1.48 91.4 -1.19 -0.28 14.8 87 6 3 7 7 3 3 0  
13 1.21 1.21 27.7 0.40 0.42 4.3 77 1 0 2 7 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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