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PDBsum entry 3ttt

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Pore analysis for: 3ttt calculated with MOLE 2.0 PDB id
3ttt
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.68 1.80 41.2 -1.22 -0.64 13.7 88 3 4 4 3 1 2 0  
2 1.32 1.48 71.9 -1.20 -0.47 14.0 83 8 2 2 10 0 6 0  
3 1.34 1.43 77.8 -1.17 -0.33 13.4 84 6 5 5 9 2 4 0  
4 1.39 1.52 83.0 -1.16 -0.35 13.3 83 5 9 5 8 2 4 0  
5 1.26 1.45 97.7 -1.43 -0.50 16.0 84 8 9 5 9 0 6 0  
6 1.17 1.22 117.1 -1.46 -0.49 18.2 84 13 11 3 10 1 4 0  
7 1.01 1.00 166.5 -1.55 -0.45 18.0 84 9 12 9 10 2 6 0  
8 1.16 1.46 183.8 -0.58 -0.11 13.6 81 14 11 9 18 16 4 0  HEM 760 A HEM 760 B
9 1.17 1.18 199.5 -0.49 -0.17 11.9 82 16 7 9 21 14 8 0  HEM 760 A HEM 760 B
10 1.19 1.35 242.9 -0.82 -0.15 16.4 83 15 14 13 19 16 4 0  HEM 760 B HEM 760 D
11 1.19 1.36 259.5 -0.67 -0.19 14.5 83 18 11 13 23 14 8 0  HEM 760 B HEM 760 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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