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PDBsum entry 3tpj

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protein ligands metals links
Hydrolase PDB id
3tpj

 

 

 

 

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Contents
Protein chain
377 a.a.
Ligands
SO4 ×8
URE ×4
Metals
_CL
Waters ×397
PDB id:
3tpj
Name: Hydrolase
Title: Apo structure of bace1
Structure: Beta-secretase 1. Chain: a. Fragment: unp residues 43-454. Synonym: aspartyl protease 2, asp2, asp 2, beta-site amyloid precursor protein cleaving enzyme 1, beta-site app cleaving enzyme 1, memapsin-2, membrane-associated aspartic protease 2. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: bace, bace1, kiaa1149. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.61Å     R-factor:   0.178     R-free:   0.196
Authors: Y.C.Xu,M.J.Li,H.Greenblatt,T.T.Chen,I.Silman,J.L.Sussman
Key ref: Y.Xu et al. (2012). Flexibility of the flap in the active site of BACE1 as revealed by crystal structures and molecular dynamics simulations. Acta Crystallogr D Biol Crystallogr, 68, 13-25. PubMed id: 22194329
Date:
08-Sep-11     Release date:   23-Nov-11    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P56817  (BACE1_HUMAN) -  Beta-secretase 1 from Homo sapiens
Seq:
Struc:
501 a.a.
377 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.3.4.23.46  - memapsin 2.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
Acta Crystallogr D Biol Crystallogr 68:13-25 (2012)
PubMed id: 22194329  
 
 
Flexibility of the flap in the active site of BACE1 as revealed by crystal structures and molecular dynamics simulations.
Y.Xu, M.J.Li, H.Greenblatt, W.Chen, A.Paz, O.Dym, Y.Peleg, T.Chen, X.Shen, J.He, H.Jiang, I.Silman, J.L.Sussman.
 
  ABSTRACT  
 
No abstract given.

 

 

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