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PDBsum entry 3tox

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3tox calculated with MOLE 2.0 PDB id
3tox
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 1.47 17.1 -0.29 -0.32 11.8 75 2 1 0 2 0 1 0  
2 1.40 1.46 18.7 0.07 -0.34 8.3 76 2 1 0 4 0 1 0  
3 1.27 1.90 18.3 -1.26 -0.58 18.5 92 2 2 2 4 0 0 0  
4 1.10 1.76 15.6 -0.72 -0.60 9.9 84 2 0 1 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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