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PDBsum entry 3tk3

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3tk3 calculated with MOLE 2.0 PDB id
3tk3
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.08 3.32 90.9 -2.43 -0.43 28.4 80 10 6 3 3 1 3 0  
2 1.56 1.56 113.0 -2.01 -0.41 27.8 83 14 7 4 4 1 0 0  
3 1.21 2.58 132.6 -2.37 -0.54 28.5 87 13 8 5 3 1 0 0  
4 1.09 1.30 33.1 -0.98 -0.29 18.8 88 4 2 2 4 1 0 0  
5 1.38 2.57 59.2 0.68 0.07 10.6 83 2 4 2 11 3 0 1  HEM 500 C CPZ 501 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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