PDBsum entry 3ss5 Go to PDB code:  Pore analysis for: 3ss5 calculated with MOLE 2.0 PDB id 3ss5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.24 38.3 -1.14 -0.27 14.4 79 5 1 3 5 0 2 0   2 2.56 2.78 40.8 -1.41 -0.73 18.6 80 2 7 1 1 1 0 0   3 2.57 2.78 46.6 -1.82 -0.70 22.6 77 4 8 1 0 2 0 0   4 1.28 1.28 135.4 -1.51 -0.39 20.1 81 11 10 8 8 4 2 0   5 1.33 1.33 145.3 -1.73 -0.39 23.0 82 13 12 9 8 3 2 0   6 1.25 1.25 31.3 -1.09 -0.38 8.1 79 1 1 4 5 1 2 0   7 1.17 1.23 35.5 -1.00 -0.34 6.8 78 3 0 4 4 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.