PDBsum entry 3sjb Go to PDB code:  Tunnel analysis for: 3sjb calculated with MOLE 2.0 PDB id 3sjb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 2.62 25.7 -0.78 -0.33 11.9 87 2 2 3 5 1 0 0  PO4 364 B 2 1.53 2.38 25.9 -0.89 -0.37 12.1 87 2 2 3 5 1 0 0  PO4 364 A 3 1.50 2.63 25.9 -1.19 -0.45 12.7 88 1 3 5 5 1 0 0  PO4 363 A 4 1.53 2.35 27.0 -0.97 -0.28 13.2 86 3 2 4 5 1 0 0  PO4 363 B 5 1.52 2.63 58.6 -0.55 -0.22 13.4 82 5 4 4 13 1 0 0  PO4 364 A PO4 364 B 6 1.54 2.40 58.9 -0.47 -0.19 13.5 82 5 4 4 13 1 0 0  PO4 364 A PO4 364 B 7 1.52 2.65 60.1 -0.77 -0.30 14.5 84 3 6 6 11 1 0 0  PO4 364 A PO4 363 B PO4 364 B 8 1.54 2.37 60.3 -0.80 -0.31 15.0 84 3 6 6 11 1 0 0  PO4 363 A PO4 364 A PO4 364 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.