PDBsum entry 3sio Go to PDB code:  Pore analysis for: 3sio calculated with MOLE 2.0 PDB id 3sio Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.39 4.31 26.7 -0.43 0.50 6.5 66 1 0 4 3 6 0 2  MLK 260 G 2 1.32 1.40 65.9 -0.75 -0.28 13.5 83 7 5 6 6 1 0 0   3 2.40 2.65 83.5 -1.05 -0.45 10.2 85 5 3 9 7 1 3 0   4 1.26 1.32 90.2 -1.85 -0.40 8.1 77 7 0 16 7 7 4 0  MRD 250 B MLK 260 B 5 1.23 1.28 89.1 -0.89 -0.24 7.8 77 4 2 10 6 7 2 0  MRD 250 B MLK 260 B 6 1.18 1.41 90.6 -1.79 -0.33 10.2 76 10 0 16 8 7 5 0  MRD 250 G MLK 260 G 7 2.37 2.65 90.1 -1.68 -0.53 12.5 85 7 4 15 9 0 5 0   8 1.34 1.40 93.4 -0.86 -0.47 8.2 84 5 2 11 8 0 4 0   9 2.37 2.61 97.9 -1.95 -0.53 12.7 83 10 5 18 8 0 7 0   10 1.33 2.63 99.9 -1.01 -0.48 8.6 86 6 3 10 6 0 3 0   11 1.45 2.44 106.4 -1.37 -0.34 18.2 82 8 9 8 5 3 1 0  MLK 260 F NAG 240 J NAG 1 Q 12 1.55 2.35 110.8 -1.21 -0.48 9.9 85 7 6 14 7 2 3 0   13 1.45 2.46 113.2 -1.59 -0.52 11.9 84 9 7 16 9 1 4 0   14 1.18 1.39 115.2 -1.25 -0.33 8.6 82 5 4 15 9 8 1 0  MRD 250 G MLK 260 G 15 1.48 2.44 120.5 -1.90 -0.50 12.5 82 12 8 17 8 1 7 0   16 1.40 2.59 127.2 -1.13 -0.48 8.9 85 8 6 14 6 1 3 0   17 1.28 1.87 128.3 -1.76 -0.45 9.4 83 7 5 25 10 7 3 0  MRD 250 G MLK 260 G 18 1.42 1.66 130.6 -1.08 -0.34 6.3 83 3 5 19 11 6 4 0  MLK 260 J 19 1.26 1.31 130.4 -1.23 -0.40 8.4 82 5 6 20 11 8 2 0  MRD 250 B MLK 260 B 20 1.27 1.33 133.7 -1.08 -0.40 7.7 81 5 4 18 13 7 2 0  MRD 250 B MLK 260 B 21 2.30 2.88 134.0 -1.33 -0.47 13.0 81 6 6 13 7 3 5 0  MLK 260 F NAG 240 J NAG 1 Q 22 2.33 2.66 135.4 -1.22 -0.46 12.8 85 6 8 13 8 0 4 1  NAG 225 C 23 1.27 1.28 141.3 -1.17 -0.40 9.2 80 6 7 17 11 8 2 0  MRD 250 B MLK 260 B 24 1.27 1.31 146.8 -1.23 -0.42 7.8 82 6 6 20 10 7 2 0  MRD 250 B MLK 260 B 25 2.34 2.51 144.2 -1.36 -0.45 14.0 86 5 8 14 8 0 4 1  NAG 225 H 26 1.26 1.31 147.2 -1.97 -0.50 10.3 82 10 8 30 12 7 6 0  MRD 250 B MLK 260 B 27 1.44 2.36 148.0 -1.20 -0.38 15.4 83 9 11 11 8 1 4 1  NAG 225 C 28 1.46 1.67 153.2 -1.10 -0.31 7.2 81 5 8 18 11 7 4 0  MLK 260 J 29 1.45 2.34 166.8 -1.34 -0.43 13.9 84 7 11 13 8 1 4 1  NAG 225 H 30 1.21 1.34 173.0 -1.07 -0.29 11.9 82 5 10 20 13 7 2 1  MRD 250 G MLK 260 G NAG 225 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.