PDBsum entry 3s3c Go to PDB code:  Tunnel analysis for: 3s3c calculated with MOLE 2.0 PDB id 3s3c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 2.07 66.8 0.88 0.48 6.3 76 2 0 3 20 8 1 0  XE 563 A XE 565 A HEM 800 A HAS 801 A 2 1.18 2.12 78.3 1.27 0.58 5.5 73 2 0 2 26 9 1 0  XE 563 A XE 564 A HEM 800 A HAS 801 A 3 1.17 1.60 80.8 0.80 0.39 8.0 77 5 0 4 24 9 1 0  HEM 800 A HAS 801 A 4 1.21 1.25 30.4 1.51 0.28 4.2 85 1 3 1 7 2 0 0   5 1.26 1.74 35.0 1.32 0.34 8.0 83 2 5 1 7 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.