PDBsum entry 3s2m Go to PDB code:  Tunnel analysis for: 3s2m calculated with MOLE 2.0 PDB id 3s2m Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.77 21.2 -1.20 0.01 17.9 78 5 2 2 2 3 1 0  P5D 401 A 2 1.28 1.76 24.5 -1.89 -0.16 28.1 84 7 3 1 2 1 1 0  P5D 401 A 3 1.30 1.81 31.1 -1.41 -0.03 23.8 81 7 3 1 2 2 1 0  P5D 401 A 4 1.28 1.76 37.0 -1.36 -0.02 24.0 80 7 1 1 3 2 2 0  P5D 401 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.