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PDBsum entry 3s1r
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Pore analysis for: 3s1r calculated with  MOLE 2.0
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PDB id
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3s1r
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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23 pores,
coloured by radius |
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25 pores,
coloured by radius
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25 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.60 |
2.71 |
47.9 |
-1.62 |
-0.17 |
23.9 |
70 |
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4 |
5 |
0 |
2 |
3 |
2 |
0 |
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2 |
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1.94 |
1.95 |
75.9 |
-1.77 |
-0.45 |
25.6 |
85 |
12 |
8 |
3 |
4 |
3 |
1 |
0 |
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3 |
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2.44 |
2.93 |
76.2 |
-2.07 |
-0.30 |
26.9 |
74 |
8 |
5 |
2 |
2 |
3 |
3 |
0 |
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4 |
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3.01 |
3.30 |
79.3 |
-1.95 |
-0.45 |
29.5 |
82 |
9 |
9 |
1 |
4 |
1 |
2 |
0 |
DA 6 R DA 18 T
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5 |
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2.07 |
2.25 |
82.1 |
-2.54 |
-0.51 |
34.7 |
77 |
13 |
15 |
1 |
5 |
2 |
1 |
0 |
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6 |
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1.62 |
1.82 |
82.0 |
-0.80 |
-0.14 |
19.8 |
74 |
5 |
7 |
2 |
6 |
3 |
2 |
0 |
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7 |
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1.62 |
1.84 |
90.8 |
-1.00 |
-0.28 |
15.9 |
79 |
13 |
4 |
7 |
10 |
1 |
4 |
0 |
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8 |
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1.44 |
2.10 |
92.2 |
-1.29 |
-0.30 |
21.4 |
82 |
5 |
6 |
4 |
6 |
1 |
2 |
0 |
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9 |
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1.92 |
2.44 |
97.5 |
-1.56 |
-0.25 |
15.7 |
81 |
6 |
3 |
7 |
4 |
3 |
1 |
0 |
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10 |
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1.80 |
3.81 |
102.9 |
-1.20 |
-0.03 |
20.8 |
78 |
7 |
6 |
6 |
10 |
6 |
1 |
0 |
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11 |
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1.97 |
2.41 |
104.7 |
-1.94 |
-0.35 |
19.3 |
83 |
11 |
4 |
10 |
3 |
3 |
2 |
0 |
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12 |
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1.74 |
1.88 |
107.8 |
-1.58 |
-0.40 |
23.2 |
80 |
11 |
11 |
4 |
5 |
5 |
2 |
0 |
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13 |
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1.54 |
2.17 |
107.9 |
-1.27 |
-0.44 |
15.6 |
87 |
6 |
6 |
8 |
9 |
2 |
2 |
0 |
DA 6 R DG 10 R GTP 100 R DA 18 T DT 19 T
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14 |
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1.39 |
2.13 |
111.0 |
-1.51 |
-0.16 |
20.2 |
81 |
10 |
6 |
8 |
11 |
5 |
3 |
0 |
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15 |
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2.55 |
3.82 |
112.0 |
-1.85 |
-0.45 |
22.0 |
82 |
8 |
6 |
8 |
4 |
1 |
0 |
0 |
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16 |
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1.97 |
2.42 |
112.6 |
-1.62 |
-0.40 |
18.6 |
81 |
6 |
5 |
8 |
4 |
2 |
1 |
0 |
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17 |
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1.20 |
1.36 |
116.3 |
-2.15 |
-0.53 |
24.2 |
78 |
10 |
9 |
8 |
6 |
3 |
3 |
0 |
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18 |
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1.55 |
2.11 |
118.1 |
-1.73 |
-0.49 |
18.7 |
85 |
10 |
5 |
8 |
5 |
2 |
4 |
0 |
DA 6 R DG 10 R GTP 100 R DA 18 T DT 19 T
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19 |
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2.45 |
2.66 |
118.2 |
-2.20 |
-0.45 |
23.2 |
83 |
14 |
6 |
10 |
3 |
2 |
1 |
0 |
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20 |
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1.35 |
2.89 |
124.2 |
-1.34 |
-0.31 |
22.8 |
83 |
13 |
12 |
7 |
10 |
5 |
3 |
0 |
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21 |
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1.84 |
2.03 |
129.4 |
-1.49 |
-0.32 |
23.1 |
77 |
14 |
11 |
3 |
6 |
7 |
4 |
0 |
DA 6 R DA 18 T
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22 |
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1.33 |
2.87 |
134.2 |
-1.68 |
-0.32 |
25.8 |
81 |
14 |
15 |
7 |
9 |
5 |
1 |
0 |
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23 |
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1.59 |
2.15 |
138.0 |
-1.49 |
-0.36 |
24.2 |
83 |
11 |
13 |
4 |
10 |
2 |
2 |
0 |
DA 6 R DA 18 T
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24 |
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1.80 |
1.86 |
145.7 |
-1.59 |
-0.21 |
21.5 |
76 |
14 |
12 |
8 |
7 |
8 |
6 |
0 |
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25 |
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1.26 |
1.58 |
177.8 |
-1.49 |
-0.27 |
20.4 |
77 |
17 |
16 |
11 |
8 |
9 |
6 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program