PDBsum entry 3s1q Go to PDB code:  Tunnel analysis for: 3s1q calculated with MOLE 2.0 PDB id 3s1q Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.21 16.4 -0.65 -0.23 17.2 68 2 0 0 1 0 0 2   2 1.14 1.44 21.2 -0.21 -0.07 14.2 80 2 1 0 2 1 0 1   3 1.18 1.77 15.1 2.01 0.59 5.1 82 1 1 1 5 0 0 0   4 1.22 1.26 28.3 -0.31 -0.08 8.9 71 2 2 2 4 4 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.