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PDBsum entry 3s1c
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Tunnel analysis for: 3s1c calculated with  MOLE 2.0
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PDB id
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3s1c
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.31 |
1.30 |
45.6 |
-0.50 |
-0.34 |
6.9 |
83 |
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2 |
3 |
5 |
6 |
4 |
0 |
0 |
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FAD 535 A GOL 550 A
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2 |
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1.48 |
1.49 |
50.0 |
0.09 |
0.13 |
9.2 |
74 |
2 |
2 |
3 |
8 |
5 |
1 |
0 |
FAD 535 A ZIR 536 A GOL 548 A GOL 550 A 15P 552 A
PEG 558 A
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3 |
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1.47 |
1.50 |
54.5 |
0.25 |
0.30 |
7.7 |
73 |
2 |
2 |
4 |
10 |
6 |
1 |
0 |
FAD 535 A ZIR 536 A GOL 547 A GOL 548 A GOL 550 A
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4 |
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1.34 |
3.02 |
25.8 |
1.14 |
0.82 |
1.2 |
57 |
0 |
0 |
0 |
6 |
3 |
3 |
0 |
PEG 557 A
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5 |
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1.30 |
3.08 |
25.9 |
0.76 |
0.77 |
1.4 |
57 |
0 |
0 |
0 |
5 |
3 |
3 |
0 |
PEG 557 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program