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PDBsum entry 3rui
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Tunnel analysis for: 3rui calculated with  MOLE 2.0
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PDB id
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3rui
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.14 |
1.45 |
24.3 |
0.81 |
0.38 |
12.2 |
77 |
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3 |
1 |
0 |
5 |
2 |
1 |
0 |
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2 |
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1.12 |
1.12 |
18.3 |
0.58 |
-0.09 |
3.9 |
88 |
1 |
0 |
0 |
6 |
1 |
1 |
0 |
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3 |
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1.34 |
1.57 |
17.6 |
-0.87 |
-0.03 |
27.0 |
70 |
3 |
2 |
0 |
3 |
1 |
0 |
0 |
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4 |
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1.30 |
1.93 |
17.9 |
2.42 |
0.64 |
1.1 |
90 |
0 |
0 |
1 |
7 |
1 |
0 |
0 |
MSE 394 A
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5 |
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1.45 |
1.77 |
23.7 |
0.01 |
0.02 |
16.4 |
78 |
3 |
2 |
0 |
7 |
1 |
0 |
0 |
MSE 394 A
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6 |
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1.34 |
1.61 |
25.9 |
0.88 |
0.39 |
14.6 |
79 |
3 |
1 |
1 |
7 |
2 |
0 |
0 |
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7 |
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1.20 |
1.26 |
34.1 |
0.32 |
0.05 |
12.9 |
76 |
4 |
2 |
0 |
7 |
2 |
0 |
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MSE 394 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program