PDBsum entry 3qqs Go to PDB code:  Pore analysis for: 3qqs calculated with MOLE 2.0 PDB id 3qqs Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.73 3.73 33.3 -1.27 -0.30 25.7 81 3 4 1 4 1 0 0   2 1.57 1.66 61.1 -1.77 -0.71 22.1 90 3 4 2 5 0 0 0   3 1.23 2.15 127.4 -1.21 -0.35 17.9 85 7 4 3 9 1 2 0   4 1.39 1.88 152.3 -1.26 -0.38 18.4 86 12 4 4 10 1 3 0   5 1.18 2.16 33.2 0.61 -0.11 8.6 89 0 3 3 7 0 0 0  PRP 401 C 6 1.23 2.49 41.5 -0.92 -0.47 12.2 79 2 3 2 7 1 1 0  PRP 401 C MG 402 C 17C 403 C 17C 404 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.