PDBsum entry 3qpy Go to PDB code:  Pore analysis for: 3qpy calculated with MOLE 2.0 PDB id 3qpy Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.63 29.4 -0.08 0.29 9.9 81 5 0 5 2 4 0 0  CL 281 D 2 1.27 1.27 41.1 -0.30 -0.58 4.1 87 1 0 7 1 2 0 0   3 1.35 1.53 43.3 -0.49 -0.59 4.6 87 2 1 8 1 2 0 0   4 1.24 1.59 70.8 -0.91 -0.17 13.1 86 6 1 12 3 4 0 0  CL 281 D 5 1.29 1.29 79.5 -0.76 -0.63 6.7 88 3 1 12 3 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.