PDBsum entry 3qml Go to PDB code:  Pore analysis for: 3qml calculated with MOLE 2.0 PDB id 3qml Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.63 1.71 26.1 -1.81 -0.57 16.1 92 2 3 5 2 0 0 0   2 2.20 2.20 27.9 -1.49 -0.68 13.9 92 2 4 4 4 1 0 0   3 1.34 4.50 30.2 -2.69 -0.64 31.9 85 5 6 3 1 0 0 0   4 1.67 1.69 34.4 -2.18 -0.68 23.1 91 4 5 4 4 0 0 0   5 1.99 1.98 37.6 -1.66 -0.63 21.2 83 5 5 4 3 1 0 0   6 2.38 2.48 41.5 -2.21 -0.67 24.7 90 5 6 4 3 0 0 0   7 1.46 3.35 50.7 -1.81 -0.47 21.6 82 6 7 3 3 2 3 0  PO4 1 B PO4 3 B 8 1.45 3.24 52.9 -1.61 -0.45 19.8 81 6 8 2 1 4 1 0  PO4 1 B PO4 3 B 9 1.97 4.17 57.4 -2.29 -0.24 25.8 80 8 5 3 3 3 3 0   10 2.14 4.04 64.1 -2.12 -0.23 25.3 79 9 6 2 1 5 1 0  PO4 3 B 11 1.48 3.36 69.5 -1.61 -0.33 16.8 82 7 7 3 2 4 2 0  PO4 1 B 12 1.98 4.17 71.3 -2.31 -0.34 25.6 80 9 7 5 3 2 4 0   13 1.68 1.68 76.0 -1.62 -0.60 18.6 88 6 5 6 6 1 0 0   14 2.13 4.04 78.0 -2.20 -0.34 25.2 79 10 8 4 1 4 2 0  PO4 3 B 15 1.70 2.87 78.4 -1.41 -0.55 17.3 90 5 5 6 7 1 0 0   16 1.46 3.08 83.3 -1.64 -0.40 16.8 82 8 9 5 2 3 3 0  PO4 1 B 17 1.46 1.64 39.6 -1.17 -0.27 18.3 78 4 2 2 5 2 2 0   18 2.30 2.46 51.5 -1.34 -0.46 23.8 88 3 5 3 3 0 0 0   19 1.67 3.11 56.2 -1.82 -0.44 20.4 79 5 8 3 1 5 1 0  PO4 2 A PO4 4 A 20 1.85 1.74 58.8 -2.66 -0.57 29.8 79 7 6 4 1 4 1 0  PO4 4 A 21 1.66 3.33 67.3 -1.94 -0.59 19.4 85 7 8 6 2 2 2 0  PO4 2 A PO4 4 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.