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PDBsum entry 3qkf
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Pore analysis for: 3qkf calculated with  MOLE 2.0
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PDB id
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3qkf
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.14 |
1.21 |
29.0 |
-3.32 |
-0.82 |
35.3 |
87 |
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3 |
4 |
4 |
1 |
0 |
0 |
0 |
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2 |
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3.63 |
4.19 |
30.0 |
-1.77 |
-0.76 |
25.1 |
83 |
3 |
6 |
3 |
3 |
0 |
1 |
0 |
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3 |
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3.63 |
4.23 |
32.6 |
-1.29 |
-0.66 |
19.8 |
85 |
2 |
6 |
3 |
3 |
0 |
1 |
0 |
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4 |
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3.63 |
4.20 |
41.4 |
-1.54 |
-0.68 |
22.8 |
80 |
3 |
7 |
3 |
4 |
0 |
3 |
0 |
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5 |
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2.36 |
2.78 |
46.4 |
-2.09 |
-0.45 |
25.1 |
84 |
5 |
4 |
1 |
2 |
1 |
1 |
0 |
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6 |
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2.01 |
1.97 |
95.5 |
-2.67 |
-0.63 |
32.9 |
75 |
6 |
13 |
0 |
3 |
2 |
4 |
0 |
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7 |
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1.76 |
1.72 |
112.5 |
-1.16 |
-0.05 |
21.8 |
76 |
19 |
8 |
6 |
10 |
6 |
1 |
0 |
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8 |
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1.19 |
3.00 |
112.6 |
-1.27 |
-0.10 |
22.2 |
76 |
19 |
7 |
6 |
11 |
8 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program