PDBsum entry 3q7d Go to PDB code:  Pore analysis for: 3q7d calculated with MOLE 2.0 PDB id 3q7d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.36 3.52 30.1 -1.26 -0.22 12.7 79 4 0 4 1 2 0 0   2 1.52 1.59 34.4 -0.65 -0.25 10.2 87 5 1 5 6 1 0 0  NPX 1591 B 3 1.19 1.26 35.3 -1.68 -0.58 15.6 75 3 3 4 2 1 2 1   4 1.20 1.38 45.3 -2.03 -0.39 17.4 77 5 3 3 2 2 3 0   5 1.98 2.89 51.5 -1.79 -0.34 17.8 79 5 2 4 1 2 1 0   6 1.31 1.31 59.6 -2.24 -0.69 29.2 82 4 4 4 4 0 0 0  NAG 9 A NAG 671 A 7 1.18 1.38 66.1 -1.70 -0.31 19.3 73 6 4 7 3 5 1 2  NAG 671 B 8 1.27 1.27 79.0 -1.31 -0.27 18.1 81 4 4 5 5 2 2 0  NAG 9 A NAG 671 A 9 1.67 1.72 91.6 -1.32 -0.35 14.8 76 5 4 7 6 3 3 2  NAG 9 A NAG 671 A 10 1.91 3.20 93.1 -1.74 -0.30 21.2 74 7 5 5 4 4 3 2  NAG 9 A NAG 671 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.