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PDBsum entry 3pyv
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Tunnel analysis for: 3pyv calculated with  MOLE 2.0
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PDB id
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3pyv
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.36 |
1.72 |
16.7 |
1.80 |
0.44 |
2.0 |
81 |
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1 |
0 |
1 |
6 |
0 |
1 |
0 |
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2 |
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1.37 |
1.58 |
34.4 |
0.52 |
0.02 |
12.1 |
81 |
2 |
2 |
1 |
6 |
0 |
1 |
0 |
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3 |
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1.58 |
1.58 |
15.4 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 1725 A G 1726 A U 1727 A G 1728 A U 1730 A G
1731 A A 1732 A G 1733 A
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4 |
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1.09 |
2.42 |
20.2 |
0.62 |
0.45 |
9.0 |
68 |
1 |
2 |
0 |
7 |
1 |
1 |
0 |
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5 |
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1.28 |
1.46 |
16.4 |
1.53 |
0.31 |
7.0 |
84 |
1 |
0 |
0 |
6 |
0 |
0 |
0 |
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6 |
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1.45 |
1.63 |
18.3 |
1.56 |
0.46 |
1.2 |
63 |
0 |
0 |
1 |
3 |
2 |
2 |
0 |
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7 |
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1.15 |
1.36 |
20.2 |
0.98 |
0.29 |
11.8 |
85 |
2 |
0 |
0 |
7 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program