PDBsum entry 3pym Go to PDB code:  Pore analysis for: 3pym calculated with MOLE 2.0 PDB id 3pym Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.38 4.27 28.7 0.29 -0.09 4.2 93 2 0 3 5 2 0 0   2 3.43 4.16 34.4 0.72 0.18 2.3 91 2 0 3 6 3 0 0  NAD 333 A 3 2.29 2.37 48.9 0.83 -0.08 2.7 87 2 0 3 9 3 0 0   4 2.27 2.39 54.9 1.08 0.04 2.1 89 2 0 3 10 3 0 0  NAD 333 A 5 3.02 4.11 72.8 0.83 0.12 3.0 92 5 0 6 10 4 0 0  NAD 333 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.