 |
PDBsum entry 3pw0
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3pw0 calculated with MOLE 2.0
|
PDB id
|
|
|
|
3pw0
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
2 tunnels,
coloured by tunnel radius |
 |
5 tunnels,
coloured by
tunnel radius
|
5 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.94 |
2.08 |
20.9 |
-1.37 |
0.02 |
29.7 |
94 |
 |
3 |
0 |
1 |
2 |
0 |
0 |
0 |
 |
DA 376 B DT 377 B DC 378 B DC 379 B DG 354 C DG 355 C
|
 |
 |
2 |
 |
2.01 |
2.32 |
22.8 |
1.58 |
0.79 |
13.0 |
90 |
2 |
0 |
1 |
5 |
0 |
0 |
0 |
DT 373 B PVX 374 B DA 375 B DA 376 B DT 358 C DC 359 C
|
 |
3 |
 |
2.00 |
2.82 |
32.4 |
0.64 |
0.37 |
15.1 |
93 |
3 |
0 |
0 |
5 |
0 |
0 |
0 |
DT 373 B PVX 374 B DA 375 B DA 376 B DC 359 C
|
 |
4 |
 |
1.99 |
2.12 |
44.1 |
-0.31 |
0.14 |
16.0 |
91 |
6 |
0 |
3 |
6 |
1 |
0 |
0 |
DTP 400 A DT 373 B PVX 374 B DA 375 B DA 376 B DC 359 C
|
 |
5 |
 |
2.04 |
2.28 |
51.3 |
-0.28 |
0.00 |
11.9 |
84 |
5 |
1 |
1 |
6 |
3 |
0 |
0 |
DTP 400 A DT 373 B PVX 374 B DA 375 B DA 376 B DT 377 B DC 378 B DC 359 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |