PDBsum entry 3pvl Go to PDB code:  Tunnel analysis for: 3pvl calculated with MOLE 2.0 PDB id 3pvl Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 2.15 34.8 -1.44 -0.21 19.0 76 5 4 5 3 7 2 0   2 1.19 2.18 35.2 -0.87 -0.01 14.0 76 5 3 5 3 8 0 0   3 1.18 2.14 37.1 -1.12 -0.20 13.5 82 5 2 7 2 7 2 0   4 1.17 1.39 23.1 0.21 -0.03 2.0 86 0 0 5 8 2 0 0   5 1.35 1.46 17.5 -0.01 0.03 9.6 79 3 0 2 3 5 1 0   6 1.28 1.44 17.5 -1.30 -0.61 17.4 82 4 2 2 3 1 3 0   7 1.19 1.33 16.8 -2.41 -0.56 34.8 80 2 3 1 1 2 0 0   8 1.12 1.49 15.3 0.08 -0.03 9.7 90 3 0 3 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.