spacer
spacer

PDBsum entry 3ps2

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 3ps2 calculated with MOLE 2.0 PDB id
3ps2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 2.83 21.2 1.91 0.89 7.0 66 2 1 0 7 3 0 1  
2 1.20 2.59 24.4 1.40 0.47 8.4 68 1 1 0 7 2 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer