PDBsum entry 3pph Go to PDB code:  Tunnel analysis for: 3pph calculated with MOLE 2.0 PDB id 3pph Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.78 66.0 -0.66 -0.19 12.2 76 5 3 4 7 5 4 0   2 1.49 1.67 37.8 -0.66 -0.09 10.7 74 2 2 3 8 3 2 0   3 1.32 1.50 38.9 -0.73 -0.26 8.7 79 2 2 4 8 2 2 0   4 1.47 1.70 39.4 -0.61 -0.11 11.1 74 2 2 3 8 3 2 0   5 1.32 1.49 40.4 -0.69 -0.19 8.4 79 2 2 4 8 2 2 0   6 1.29 2.46 15.1 -0.79 -0.13 15.2 90 2 1 4 3 0 0 0   7 1.21 1.58 15.4 -0.51 -0.05 13.5 94 2 1 4 2 0 0 0   8 1.30 2.47 21.9 -0.92 -0.16 13.7 92 2 0 5 4 0 0 0   9 1.22 1.59 22.2 -0.72 -0.10 12.7 95 2 0 5 3 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.