spacer
spacer

PDBsum entry 3po7

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3po7 calculated with MOLE 2.0 PDB id
3po7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.49 1.56 37.3 -0.38 0.02 5.1 72 0 1 2 5 4 1 0  FAD 600 A ZON 601 A
2 1.29 1.90 54.4 0.00 0.37 6.1 75 2 2 3 7 7 1 0  FAD 600 A ZON 601 A
3 1.10 1.27 17.0 -1.07 -0.28 13.0 79 2 1 1 2 2 0 0  
4 1.17 1.42 18.3 -1.25 -0.33 12.8 81 2 1 1 3 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer