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PDBsum entry 3pfh

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3pfh calculated with MOLE 2.0 PDB id
3pfh
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.97 2.10 28.2 -0.68 0.33 16.0 77 5 1 2 5 5 0 0  SAH 264 A T3Q 301 A
2 1.17 1.81 29.4 -0.95 0.00 14.3 79 3 2 1 4 4 0 0  SAH 264 A
3 1.21 1.80 32.1 -0.94 -0.03 12.6 79 2 2 2 4 4 0 0  SAH 264 D
4 1.13 1.76 35.8 -0.69 0.30 14.1 79 6 1 3 3 6 0 0  SAH 264 A T3Q 301 A
5 1.96 2.09 37.2 -0.68 0.48 16.3 79 5 1 2 6 5 0 0  SAH 264 D T3Q 301 D
6 1.24 1.92 37.6 -0.59 0.41 13.0 79 4 1 2 4 6 0 0  SAH 264 D T3Q 301 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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