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PDBsum entry 3pco

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3pco calculated with MOLE 2.0 PDB id
3pco
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.54 1.76 33.0 -3.00 -0.56 40.8 83 5 8 1 1 0 1 0  AMP 999 C
2 1.52 1.70 54.8 -1.05 -0.25 20.5 79 5 4 2 2 1 2 0  
3 2.02 2.19 66.3 -1.82 -0.56 23.1 88 5 8 4 3 1 0 0  
4 1.99 2.18 88.3 -1.10 -0.39 21.0 82 6 9 2 5 1 1 0  
5 1.30 2.87 90.0 -1.57 -0.35 24.7 80 8 8 4 4 3 0 0  
6 1.26 2.85 93.1 -1.97 -0.33 28.7 81 9 8 4 4 4 0 0  
7 1.19 1.35 112.1 -0.23 0.08 22.0 83 9 10 3 11 2 1 0  AMP 999 C
8 2.00 2.48 175.3 -2.16 -0.42 28.3 85 12 13 8 5 3 0 0  AMP 999 C
9 1.28 1.96 302.0 -1.60 -0.43 22.6 85 21 15 12 11 3 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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