PDBsum entry 3ozu Go to PDB code:  Tunnel analysis for: 3ozu calculated with MOLE 2.0 PDB id 3ozu Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.81 20.9 1.99 0.68 1.3 64 0 0 1 6 2 0 0  X89 411 A 2 1.27 1.26 36.7 1.75 0.62 5.7 73 2 0 2 10 4 0 0  HEM 404 A PO4 406 A X89 411 A 3 1.39 1.60 39.0 0.49 0.32 9.4 74 3 0 5 9 4 1 0  HEM 404 A PO4 406 A X89 411 A 4 1.39 1.65 43.4 0.33 0.27 13.8 74 4 3 2 10 6 0 0  HEM 404 A PO4 406 A X89 411 A 5 1.39 1.57 45.2 0.06 0.19 10.2 74 3 1 6 11 5 0 0  HEM 404 A FAD 405 A PO4 406 A X89 411 A 6 1.38 1.59 45.9 0.35 0.16 9.9 78 5 1 3 12 5 0 0  HEM 404 A PO4 406 A X89 411 A 7 1.39 1.61 46.5 -0.12 0.22 10.6 74 4 0 5 9 5 0 0  HEM 404 A PO4 406 A X89 411 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.