PDBsum entry 3oxc

Tunnel analysis for: 3oxc calculated with

MOLE 2.0

PDB id

3oxc

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

0 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.40

2.47

15.0

0.30

-0.03

12.1

84

2

1

0

3

1

1

0

ROC 401 A

2

2.25

2.37

15.8

-0.20

-0.24

17.5

86

2

2

0

4

1

0

0

ROC 401 A

3

2.33

2.33

16.2

0.41

-0.16

10.6

90

1

2

0

5

0

1

0

ROC 401 A

4

2.28

2.46

16.9

0.07

-0.13

16.0

86

1

2

0

5

1

1

0

ROC 401 A

5

2.66

4.11

22.5

-0.11

-0.14

12.7

85

1

3

0

4

1

1

0

ROC 401 A

6

2.69

2.78

23.2

-0.28

-0.18

15.2

84

2

3

0

4

1

1

0

ROC 401 A

7

2.52

2.70

25.8

0.78

0.16

9.2

88

1

2

0

6

1

1

0

ROC 401 A

8

2.36

2.70

26.5

0.52

0.09

11.7

86

2

2

0

6

1

1

0

ROC 401 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.