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PDBsum entry 3omn
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Tunnel analysis for: 3omn calculated with  MOLE 2.0
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PDB id
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3omn
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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10 tunnels,
coloured by
tunnel radius
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10 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.45 |
2.48 |
58.3 |
0.42 |
0.38 |
11.6 |
82 |
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6 |
2 |
0 |
14 |
5 |
1 |
0 |
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HEA 2 C
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2 |
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1.15 |
1.16 |
62.1 |
1.39 |
0.74 |
5.4 |
72 |
3 |
1 |
1 |
17 |
8 |
0 |
0 |
HEA 2 C
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3 |
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1.44 |
2.51 |
64.5 |
1.36 |
0.74 |
7.1 |
75 |
4 |
1 |
1 |
18 |
9 |
0 |
0 |
HEA 1 C HEA 2 C
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4 |
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1.61 |
1.71 |
15.3 |
-0.24 |
-0.38 |
3.3 |
87 |
1 |
0 |
5 |
3 |
0 |
0 |
0 |
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5 |
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1.39 |
1.48 |
17.0 |
0.78 |
0.66 |
16.5 |
76 |
2 |
1 |
0 |
5 |
4 |
0 |
0 |
TRD 3 A
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6 |
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1.38 |
1.40 |
15.9 |
0.68 |
0.61 |
16.7 |
78 |
2 |
1 |
0 |
5 |
3 |
0 |
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TRD 3 D
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7 |
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1.38 |
1.40 |
39.2 |
1.56 |
0.66 |
6.7 |
81 |
2 |
1 |
0 |
9 |
5 |
0 |
0 |
TRD 3 D
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8 |
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1.46 |
1.74 |
15.6 |
-0.63 |
-0.47 |
5.2 |
88 |
1 |
0 |
4 |
3 |
0 |
0 |
0 |
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9 |
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1.08 |
1.27 |
19.3 |
0.32 |
0.03 |
3.5 |
80 |
2 |
0 |
4 |
2 |
2 |
1 |
0 |
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10 |
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1.51 |
2.59 |
16.1 |
-1.24 |
-0.18 |
17.8 |
75 |
1 |
2 |
0 |
1 |
3 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program