PDBsum entry 3ogq Go to PDB code:  Tunnel analysis for: 3ogq calculated with MOLE 2.0 PDB id 3ogq Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.43 15.9 0.56 0.07 8.9 86 1 1 1 5 0 0 0  AB1 200 A 2 1.41 1.41 17.2 -0.11 -0.13 12.6 93 2 1 1 3 0 0 0  AB1 200 A 3 1.42 1.42 27.1 0.66 0.05 8.4 89 2 2 0 4 0 0 0  AB1 200 A 4 1.41 1.41 27.4 0.90 0.06 6.1 92 1 1 1 6 0 0 0  AB1 200 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.