spacer
spacer

PDBsum entry 3oeh

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3oeh calculated with MOLE 2.0 PDB id
3oeh
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
19 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.68 1.89 29.7 -2.35 -0.39 26.7 74 4 3 2 3 2 0 0  
2 1.45 2.17 34.8 -1.59 -0.39 22.4 81 5 3 2 4 1 1 0  
3 1.51 1.68 58.5 -1.05 -0.46 14.6 77 2 7 1 4 1 3 0  
4 2.35 2.44 78.2 -2.46 -0.73 27.4 80 8 10 7 2 0 1 0  
5 1.48 1.59 114.8 -1.54 -0.42 19.4 83 10 8 6 9 1 4 0  
6 1.21 2.94 121.0 -1.26 -0.35 20.8 78 8 13 6 14 4 1 0  
7 1.53 1.53 150.9 -1.64 -0.44 17.4 81 13 10 13 12 6 4 0  
8 1.52 1.58 165.6 -1.73 -0.46 17.8 82 13 12 16 10 7 5 0  
9 1.52 1.69 172.8 -1.53 -0.37 18.7 82 15 10 13 11 6 6 0  
10 1.45 1.59 183.5 -1.51 -0.37 19.7 81 16 11 13 11 7 4 0  
11 1.22 1.59 195.7 -1.00 -0.26 17.4 80 13 10 10 17 7 4 0  
12 2.29 2.45 197.0 -0.88 -0.30 17.5 84 13 12 16 19 2 1 0  
13 1.23 1.20 203.5 -0.44 -0.20 15.2 82 15 13 8 28 5 4 0  ANP 600 O
14 2.26 2.17 205.9 -1.16 -0.35 16.9 83 18 10 14 18 4 1 0  ANP 600 K
15 2.42 3.23 211.8 -2.31 -0.61 24.8 82 20 19 21 10 5 1 0  
16 2.35 2.48 212.3 -2.12 -0.57 21.0 83 20 16 23 10 4 1 0  ANP 600 K
17 2.20 3.19 229.4 -1.31 -0.36 20.2 82 22 16 13 20 4 1 0  ANP 600 K
18 1.29 2.55 240.7 -1.40 -0.36 19.9 81 18 17 22 20 3 2 0  
19 1.40 3.82 242.0 -1.03 -0.31 21.5 83 17 15 13 22 2 2 0  
20 1.22 1.58 255.2 -1.14 -0.27 21.9 82 18 18 10 18 3 4 0  
21 1.39 4.01 275.0 -2.21 -0.60 25.3 83 21 18 21 12 2 3 0  
22 1.31 1.30 282.9 -0.77 -0.26 15.7 83 18 19 17 35 5 6 0  
23 1.35 1.41 289.8 -1.72 -0.50 20.2 82 20 24 22 19 4 7 0  
24 1.22 1.74 294.5 -1.65 -0.37 24.4 81 27 22 19 19 6 3 0  
25 1.61 2.49 299.9 -2.06 -0.57 23.0 82 26 21 25 17 5 2 0  ANP 600 K
26 1.27 1.27 344.6 -1.57 -0.41 18.5 79 25 23 22 19 11 14 0  
27 1.23 1.25 569.3 -1.43 -0.39 20.9 79 39 33 19 32 7 16 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer