spacer
spacer

PDBsum entry 3o2x

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3o2x calculated with MOLE 2.0 PDB id
3o2x
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
7 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.18 2.34 25.2 -1.44 -0.59 12.9 89 4 2 5 3 0 2 0  3O2 1801 A SO4 6 B
2 2.26 2.29 32.0 -0.73 -0.11 14.8 89 8 4 5 6 4 2 0  
3 2.17 2.33 40.0 -0.88 -0.41 10.7 88 5 1 6 5 0 6 0  3O2 1801 A
4 1.91 2.62 44.0 -1.09 -0.46 11.5 78 4 7 2 3 4 8 0  
5 1.80 1.97 53.6 -1.67 -0.37 21.8 80 3 6 1 2 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer