spacer
spacer

PDBsum entry 3nsh

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3nsh calculated with MOLE 2.0 PDB id
3nsh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.43 28.4 -0.91 -0.48 8.6 91 3 0 4 4 0 0 0  
2 1.43 1.43 29.3 -0.49 -0.27 8.1 88 2 2 4 3 2 0 0  
3 1.43 1.43 29.8 -0.56 -0.38 8.2 91 3 0 4 4 0 0 0  
4 1.43 1.43 29.9 -0.70 -0.11 12.3 86 1 2 2 4 2 0 0  
5 1.17 1.17 20.5 1.60 0.51 1.4 76 0 0 2 7 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer