PDBsum entry 3npy Go to PDB code:  Pore analysis for: 3npy calculated with MOLE 2.0 PDB id 3npy Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.61 2.00 33.2 -0.84 -0.33 14.1 76 2 2 0 3 2 3 0  CL 513 A 2 1.50 1.65 35.9 -0.49 -0.29 11.7 74 3 3 1 2 2 3 0   3 1.62 1.79 54.1 -0.29 -0.23 10.4 78 3 3 1 6 4 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.