spacer
spacer

PDBsum entry 3nnh

Go to PDB code: 
Top Page protein dna_rna Protein-protein interface(s) pores links
Pore analysis for: 3nnh calculated with MOLE 2.0 PDB id
3nnh
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.53 2.56 26.2 -1.88 -0.58 17.7 82 4 1 2 2 1 0 0  U 2 F G 4 F U 5 F U 6 F U 7 F
2 2.21 2.56 30.1 -1.56 -0.34 23.4 86 4 1 0 1 0 0 0  U 5 F U 6 F U 7 F U 8 F G 9 F U 10 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer