PDBsum entry 3nkt Go to PDB code:  Tunnel analysis for: 3nkt calculated with MOLE 2.0 PDB id 3nkt Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.63 1.63 15.8 -1.10 -0.33 20.1 84 4 2 0 3 1 0 0  GOL 371 A 2 1.40 1.40 26.5 -0.83 -0.42 7.2 89 1 2 5 3 0 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.