spacer
spacer

PDBsum entry 3nfh

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 3nfh calculated with MOLE 2.0 PDB id
3nfh
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.71 1.86 25.1 -1.44 -0.37 18.5 86 4 1 2 4 1 0 0  
2 1.67 1.67 32.9 -2.10 -0.53 25.0 81 5 3 5 3 0 1 0  
3 1.68 1.67 37.4 -1.34 -0.32 19.5 84 6 2 6 4 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer