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PDBsum entry 3n8h

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3n8h calculated with MOLE 2.0 PDB id
3n8h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 2.73 37.4 0.75 0.20 2.8 83 1 1 4 6 2 2 0  MSE 29 A GOL 272 A
2 1.28 2.79 41.9 -1.12 -0.07 17.2 81 5 3 5 5 3 2 0  MSE 29 A AMP 270 A PRO 271 A GOL 272 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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