PDBsum entry 3n5t Go to PDB code:  Pore analysis for: 3n5t calculated with MOLE 2.0 PDB id 3n5t Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.05 2.05 36.5 -0.51 0.14 8.1 72 2 3 5 4 6 1 1  HEM 500 A XFJ 800 A ACT 860 A GOL 880 A 2 2.03 2.10 36.8 0.09 0.10 10.8 78 2 1 2 8 3 3 1  HEM 500 B XFJ 800 B ACT 860 B 3 1.26 2.10 46.0 -1.26 -0.10 11.7 79 5 4 7 6 3 1 0  HEM 500 A XFJ 800 A GOL 880 A 4 1.32 1.35 61.9 -0.45 -0.09 8.8 79 3 3 8 9 3 3 1  HEM 500 A XFJ 800 A ACT 860 A 5 1.35 1.40 62.4 -1.03 -0.05 10.2 75 5 4 6 6 6 4 2  HEM 500 A XFJ 800 A GOL 880 A 6 1.26 1.98 67.4 -1.00 -0.27 10.2 78 5 4 9 7 2 4 2   7 1.37 1.41 73.2 -0.55 -0.04 8.8 74 3 3 6 9 6 6 3  HEM 500 A XFJ 800 A ACT 860 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.