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PDBsum entry 3mo4

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3mo4 calculated with MOLE 2.0 PDB id
3mo4
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 2.82 25.6 1.00 0.21 3.1 67 1 1 1 6 1 1 0  MSE 31 B MSE 76 B MSE 301 B
2 1.40 1.43 28.8 0.63 0.19 8.0 63 1 2 0 7 3 0 0  MSE 29 A MSE 31 A MSE 76 A
3 1.83 1.94 44.2 -1.87 -0.45 25.4 87 7 3 1 5 1 0 0  
4 1.59 2.16 54.4 -0.35 -0.12 14.9 73 4 1 0 9 1 0 0  MSE 31 A MSE 76 A
5 1.98 2.03 56.7 -1.01 -0.37 18.3 86 5 0 0 5 1 0 0  MSE 29 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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