PDBsum entry 3ml4 Go to PDB code:  Pore analysis for: 3ml4 calculated with MOLE 2.0 PDB id 3ml4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.48 3.58 25.1 -0.83 -0.41 14.4 77 1 3 0 6 3 2 0  MSE 1 B 2 1.28 1.57 36.5 -0.43 -0.03 11.7 76 4 1 2 5 3 1 0   3 1.41 1.49 52.0 -1.74 -0.34 16.6 82 7 3 2 2 1 2 0   4 1.29 1.28 56.1 -2.15 -0.41 21.4 86 8 5 4 1 2 0 0   5 1.73 2.07 62.6 -1.29 -0.25 15.4 73 7 2 0 6 5 4 0   6 1.74 2.17 68.7 -1.08 -0.20 14.1 74 6 2 0 8 7 4 0  MSE 1 B 7 1.42 1.87 81.2 -2.16 -0.45 25.4 79 10 7 5 5 4 0 1   8 1.39 1.45 99.1 -2.05 -0.39 21.1 78 7 4 2 3 3 3 0  MSE 149 D 9 1.40 1.74 187.8 -1.63 -0.54 18.2 82 10 9 5 4 2 4 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.