 |
PDBsum entry 3m0c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3m0c calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3m0c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
10 tunnels,
coloured by tunnel radius |
|
10 tunnels,
coloured by
tunnel radius
|
10 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.24 |
1.36 |
17.4 |
-1.35 |
-0.33 |
12.6 |
76 |
|
3 |
1 |
2 |
2 |
1 |
1 |
0 |
|
|
 |
|
2 |
 |
1.24 |
1.36 |
21.7 |
-0.80 |
0.00 |
18.9 |
75 |
4 |
0 |
2 |
3 |
1 |
0 |
0 |
|
|
3 |
 |
1.35 |
1.63 |
26.5 |
0.49 |
-0.26 |
6.1 |
90 |
1 |
1 |
3 |
4 |
0 |
0 |
1 |
|
|
4 |
 |
1.12 |
1.51 |
28.3 |
-1.04 |
-0.51 |
11.8 |
90 |
2 |
1 |
5 |
3 |
1 |
1 |
0 |
|
|
5 |
 |
1.18 |
1.30 |
24.7 |
-1.31 |
-0.57 |
23.1 |
87 |
1 |
3 |
0 |
4 |
0 |
0 |
0 |
|
|
6 |
 |
1.21 |
1.31 |
30.1 |
0.25 |
-0.27 |
10.9 |
83 |
0 |
3 |
0 |
6 |
1 |
0 |
0 |
|
|
7 |
 |
1.19 |
2.94 |
18.9 |
0.73 |
0.27 |
5.0 |
82 |
1 |
0 |
2 |
3 |
2 |
0 |
0 |
|
|
8 |
 |
1.48 |
1.60 |
16.4 |
1.51 |
0.34 |
3.8 |
73 |
0 |
1 |
0 |
3 |
1 |
0 |
2 |
|
|
9 |
 |
1.25 |
1.25 |
15.1 |
-1.41 |
-0.30 |
23.1 |
79 |
2 |
1 |
2 |
1 |
1 |
0 |
0 |
|
 |
10 |
 |
1.17 |
1.17 |
16.0 |
-0.49 |
0.20 |
15.5 |
88 |
2 |
2 |
1 |
4 |
1 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program