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PDBsum entry 3ltp

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3ltp calculated with MOLE 2.0 PDB id
3ltp
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.62 1.61 30.2 -1.22 -0.18 19.8 78 4 4 1 4 3 2 0  BMP 229 A
2 1.14 3.21 32.6 -1.05 -0.08 18.8 77 4 4 1 5 3 2 0  BMP 229 B
3 1.58 1.63 35.6 -1.08 -0.26 16.1 79 4 4 1 5 3 2 0  BMP 229 A
4 1.15 3.27 38.1 -1.07 -0.24 15.4 78 4 4 1 6 3 2 0  BMP 229 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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