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PDBsum entry 3lt2

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3lt2 calculated with MOLE 2.0 PDB id
3lt2
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.63 43.7 0.53 0.28 5.2 83 2 2 3 11 4 1 0  NAD 601 B FT3 602 B
2 1.32 1.32 48.6 -0.70 -0.02 16.4 75 4 2 3 4 3 1 0  
3 1.29 1.81 52.7 -0.62 -0.06 16.5 76 5 2 5 6 3 1 0  
4 1.39 1.97 56.0 0.21 0.39 7.0 81 3 0 4 11 6 1 0  NAD 601 B FT3 602 B
5 1.24 1.53 59.7 0.07 0.14 8.3 79 5 3 5 11 4 1 0  NAD 501 A FT3 502 A
6 1.22 2.02 62.4 -0.50 0.17 10.8 77 6 0 4 9 6 1 0  NAD 501 A FT3 502 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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